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DOAJ Open Access 2026
Identification and characterization of a novel bacteriocin PFB252 from Bacillus velezensis with anti-methicillin-resistant Staphylococcus aureus and anti-biofilm activity for dairy food preservation

Ruixue Pan, Yuexia Ding, Jinju Peng et al.

ABSTRACT: The emergence of methicillin-resistant Staphylococcus aureus (MRSA) and its robust biofilm-forming capability pose severe threats to public health, livestock production, and food safety, and underscores the urgent need for novel antibacterial and anti-biofilm agents. In this study, we identified and characterized a novel bacteriocin, PFB252, derived from Bacillus velezensis through a multistep purification process involving acid precipitation, TA-GF75 gel column chromatography, Tiderose Q HP anion-exchange chromatography (TRUKING, Changsha, China), and reversed-phase HPLC. PFB252 exhibited remarkable thermal stability, pH tolerance, and resistance to enzymatic degradation, and demonstrated potent antibacterial activity against MRSA. At subinhibitory concentrations (1/32× minimum inhibitory concentration [MIC] and 1/16× MIC), PFB252 significantly disrupted biofilm formation and impaired the metabolic viability of embedded bacteria, and it drastically reduced extracellular polysaccharide, the key component of the biofilm matrix. Transcriptional analysis further revealed that PFB252 at subinhibitory concentrations downregulated critical biofilm-associated genes. PFB252 exhibited strong antimicrobial efficacy in dairy applications and could reduce MRSA counts in milk from 103 to <10 cfu/mL within 4 d at MIC and maintain suppression in cheese below 102 cfu/g over 7 d. These properties highlight PFB252's potential as a natural biopreservative for combating MRSA in food systems and offer a promising solution for food safety applications.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2026
The interaction of essential fatty acids and conjugated linoleic acid on regulation of milk synthesis and the formation of milk ingredients from [13C6]-glucose during early lactation in dairy cows

H.M. Hammon, L. Bachmann, L. Vogel et al.

ABSTRACT: Long-chain fatty acids such as essential fatty acids (EFA) and CLA have the potential to affect glucose metabolism and milk synthesis in the mammary gland. The present study tested the hypothesis that EFA, CLA, or a combined EFA and CLA treatment influences the formation of milk constituents from glucose and regulation of milk synthesis during early lactation. For this purpose, the carbon flow from glucose and important enzymes and regulatory factors of milk synthesis were measured in the mammary gland. Rumen-cannulated German Holstein cows (n = 38) were investigated from wk 9 antepartum until wk 9 postpartum. The cows were abomasally infused with coconut oil (CTRL, 76 g/d; n = 9), 78 g/d linseed and 4 g/d safflower oil (EFA treatment; n = 9), Lutalin (CLA treatment, isomers cis-9,trans-11 and trans-10,cis-12 CLA, each 10 g/d; n = 10), or the combination of EFA+CLA (n = 10). In wk 3 postpartum, [13C6]-glucose was infused intravenously for 4 h, and 13C-enrichment was measured in milk ingredients (lactose, casein, and fat) before and several times after tracer infusion. Tissue from the mammary gland was collected after tracer infusion in wk 4 by biopsy and in wk 9 after slaughtering the cows. Tissue was used for measuring gene and protein (only wk 9) expression of parameters related to milk synthesis. Milk FCM and ECM decreased with CLA treatment. After [13C6]-glucose infusion, 13C-enrichment increased about 30-fold higher in lactose than in casein and milk fat. 13C-Enrichment in milk fat increased more, but in casein increased less in CLA-treated than non-CLA-treated cows after infusion of [13C6]-glucose. In milk fat, 13C-enrichment of triglycerides was closely related to glycerol. The mRNA abundance of key factors and enzymes associated with milk fat synthesis, such as SREBF1, ACACA, FASN, ELOVL2, and EEF1A1, was reduced by CLA treatment. Protein expression of FAS and SREBP (68 kD) was reduced, but FABP4 was increased in cows infused with CLA. The reduced 13C-enrichment in casein of CLA-treated cows was partly combined with lower urea and protein concentrations in milk but no clear changes in gene and protein expression of parameters associated with milk protein synthesis. The EFA treatment did not affect 13C-enrichment of milk ingredients after [13C6]-glucose infusion, but protein expression of SREBP (68 kD) was reduced. Results indicated a coordinated inhibition of parameters related to milk fat synthesis in the mammary gland in CLA and EFA+CLA cows. The inhibitory effect on milk fat synthesis was associated with an elevated carbon flux of glucose in glycerol of the triglycerides in milk fat. Reduction of glucose flux in casein by CLA treatment and less milk urea pointed at less nonessential AA synthesized from glucose, but regulation of milk protein synthesis was barely affected by CLA and EFA+CLA. The EFA treatment had no influence on glucose flux into milk ingredients and seems to barely affect milk fat and protein synthesis in the present study.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2025
Consequences of weaning and separation for feed intake and milking characteristics of dairy cows in a cow-calf contact system

C.L. van Zyl, H.K. Eriksson, E.A.M. Bokkers et al.

ABSTRACT: In cow-calf contact (CCC) systems breaking the maternal bond may induce stress for the cow, thereby affecting feed intake, milk yield, milk flow rate, and milk electrical conductivity. This study aimed to determine the consequences of weaning and separation strategies in CCC systems for feed intake and milking characteristics of the cow. In 2 experiments, Swedish Holstein and Swedish Red cows either had (experiment 1) whole-day CCC (CCC1, n = 12) for 8.5 ± 1.2 wk (mean ± SD) followed by 12 h of daytime CCC for 8 wk, before abrupt weaning and separation at 16.4 ± 1.2 wk, or (experiment 2) whole-day CCC for 16 ± 1.0 wk; thereafter half of the calves were weaned via nose flaps for 2 wk (NF, n = 10) before physical separation and half via nose flaps for 1 wk and fence-line contact for 1 wk (NFFL, n = 9). Cows were compared with conventionally managed cows (CONV1 or CONV2 in experiment 1 or 2) separated from their calves within 12 h postpartum. In experiment 1, the study period included the week before and after the system switch from whole-day to daytime CCC, and the week before and after separation. In experiment 2, the study period included the week before the start of weaning, during weaning, and 1 week after separation. All cows were milked in the same automatic milking unit. In experiment 1, feed intake of CCC1 cows at separation tended to be lower than CONV1 cows. In experiment 2, roughage intake of NF, NFFL, and CONV2 cows did not differ, but the concentrate intake of NF cows was lower than that of CONV2 cows. In experiment 1, the system switch did not affect milking characteristics. However, after separation, machine milk yield and milk electrical conductivity of CCC1 cows increased, remaining lower than CONV1 cows. In experiment 2, machine milk yield of NF and NFFL cows increased when calves were fitted with nose flaps, but remained lower than CONV2 cows. In the week after separation, milk yield of NFFL cows was similar to that of CONV2 cows, and the NF cows remained lower. In the week before weaning, milk flow rates of NF cows were lower than those of CONV2 cows, and the NFFL cows did not differ. Before weaning, milk electrical conductivity of NF and NFFL cows was lower than that of CONV2 cows, but not thereafter. In conclusion, machine milk yield of CCC cows remained lower either until the week of separation, for NFFL cows, or until 3 or 11 wk after weaning and separation for CCC1 and NF cows of experiments 1 and 2, respectively. Cow-calf contact reduced milk electrical conductivity, and milk and peak milk flow rates increased the week after separation of cow and calf. Not for experiment 2, but for experiment 1, cow roughage and concentrate intake decreased at separation and recovered within a week, indicating that abrupt separation exerted a greater impact on the cow than separation after nose flap weaning or fence-line contact. Future studies should compare both weaning strategies within the same experimental setup, also focusing on the consequences for calves.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2025
Effects of different types of milk consumption on type 2 diabetes and the mediating effect of AA: A Mendelian randomization study of East Asian populations

Qing-Ao Xiao, Lin Chen, Xiao-Long Li et al.

ABSTRACT: There is currently a lack of research examining the association between the consumption of different dairy products and type 2 diabetes (T2D) in East Asian populations. To address this gap, the present study employs Mendelian randomization to investigate the potential effects of 3 different types of milk consumption (including whole milk, semi-skim milk, and skim milk) on the risk of developing T2D. The results indicate that both whole milk and skim milk are associated with an increased risk of T2D (whole milk: odds ratio [OR] = 1.022, 95% CI: 1.001–1.044; skim milk: OR = 1.023, 95% CI: 1.007–1.039). Mediation analysis revealed that asparagine acts as a mediator between skim milk consumption and T2D, with a mediation effect of 0.003 (95% CI: 0.000 to 0.008), accounting for 14.269% of the total effect.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2025
Combining high-pressure processing and low storage temperature to extend the functionality shelf life of low-moisture, part-skim mozzarella cheese

L.A. Jiménez-Maroto, S. Govindasamy-Lucey, J.J. Jaeggi et al.

ABSTRACT: High-pressure processing (HPP) and low-temperature storage (0°C) were explored as alternatives to freezing for extending the performance shelf life of low-moisture, part-skim (LMPS) mozzarella intended for export. Batches (n = 5) of reduced Na LMPS mozzarella were manufactured using camel chymosin as a lower proteolytic type of rennet. Cheeses were stored for 2 wk at 4°C, divided into control (non-HPP) and HPP (600 MPa for 3 min) groups, and stored at 3 different temperatures (4, 0, and −18°C) for 365 d. Analyses were performed at 0, 90, 150, 210, 270, and 365 d of storage. Frozen and 0°C samples (∼2.3 kg) were thawed/tempered at 4°C for 1 wk before analysis. Urea PAGE and quantification of the pH 4.6 soluble N over time were used to monitor primary proteolysis. Body and rheological properties were monitored using texture profile analysis (TPA) and dynamic low-amplitude oscillatory rheology. Changes in flavor, body, shred properties, and pizza performance were evaluated using quantitative descriptive analysis with 12 trained panelists using a 15-point scale. High-pressure processing treatment caused ∼5 log cfu/mL reduction in starter counts, partial solubilization of the insoluble Ca, and a small pH increase (from ∼5.2 to 5.3). The rate of primary proteolysis was reduced by HPP and low-temperature storage. High-pressure processing treatment reduced initial cheese hardness, but no further significant decrease was observed over storage time, whereas the hardness of non-HPP samples decreased over the 365 d of storage, apart from the frozen samples. In pizza applications, blister quantity development and loss of strand thickness were limited by storage at −18°C. Freezing LMPS mozzarella to −18°C gave the least changes in proteolysis and pizza performance over the 365 d of study, storage of cheese at 0°C slowed the loss of hardness and the deterioration of pizza performance attributes. The combination of HPP and 0°C storage of cheese resulted in little change in blistering quantity of pizza during the 365 d of study, whereas cheese stored at 0°C had blisters covering much of the pizza after this extended storage time. Combining HPP with low-temperature storage is a promising alternative approach to freezing for the extension of the functionality shelf life of LMPS mozzarella.

Dairy processing. Dairy products, Dairying
S2 Open Access 2024
From bowls to pots: The dairying revolution in Northwest Turkey, a view from Barcın Höyük, 6600 to 6000 BCE

H. Özbal, Adrià Breu, L. Thissen et al.

Research has identified Northwest Turkey as a key region for the development of dairying in the seventh millennium BCE, yet little is known about how this practice began or evolved there. This research studies Barcın Höyük, a site located in Bursa’s Yenişehir Valley, which ranges chronologically from 6600 BCE, when the first evidence of settled life appears in the Marmara Region, to 6000 BCE, when Neolithic habitation at the site ceases. Using pottery sherds diagnostic by vessel category and type, this paper aims at identifying which ones may have been primarily used to store, process, or consume dairy products. Organic residue analysis of selected samples helped address the process of adoption and intensification of milk processing in this region over time. The lipid residue data discussed in this paper derive from 143 isotopic results subsampled from 173 organic residues obtained from 805 Neolithic potsherds and suggest that bowls and four-lugged pots may have been preferred containers for processing milk. The discovery of abundant milk residues even among the earliest ceramics indicates that the pioneer farmers arrived in the region already with the knowhow of dairying and milk processing. In fact, these skills and the reliance on secondary products may have given them one of the necessary tools to successfully venture into the unfarmed lands of Northwest Anatolia in the first place.

4 sitasi en Medicine
DOAJ Open Access 2024
Soft Cheese-Making with Buttermilk: Physico-chemical, Sensory, Textural Properties, and Microstructure Characterization

B. Meghzili, F.A. Benyahia, K. Szkolnicka et al.

Background: Buttermilk, a significant by-product of the dairy industry, is acknowledged as a beneficial food due to its content of water-soluble vitamins, polar lipids, and milk fat globule membranes. This research is focused on investigating the potential of buttermilk as a substitute in the production of a novel soft cheese type ‘‘camembert’’. Methods: A total of 12 cheese samples of camembert cheese, both with and without buttermilk, were prepared and subjected to a series of physico-chemical analyses in October 2023 to measure protein, fat, total solids, pH, and production yield. Texture Profile Analysis was applied to evaluate textural characteristics, and the microstructure was examined using Scanning Electron Microscopy. A hedonic scale was employed in sensory evaluation to measure taste intensity. Results: The sample containing 90% cow's milk and 10% buttermilk exhibited the most significant (p≤0.05) physico-chemical characteristics as production yield of 45.33%±0.710, protein content of 28.9%±0.58, fat content of 24.88%±0.026, total solids of 54.62±0.23, and a pH of 6.42±0.58. Sensory evaluations demonstrated that camembert samples containing buttermilk were distinguished by high sensory quality and satisfactory taste profiles. In addition, a dense and tightly fused protein matrix was observed in the microstructure of the buttermilk fortified cheese. The results also emphasized that the acidic nature of buttermilk significantly affected the production yield, total solids content, and textural characteristics, evidenced by a hardness of 3.36 N and fracturability of 1.75 N. Conclusion: The results validate the use of buttermilk as an effective alternative in the production of a new type of soft cheese, manifesting improved sensory, structural, and physico-chemical characteristics. This investigation supports the innovative utilization of buttermilk in cheese production, potentially offering a valuable avenue for dairy industry by-products. DOI: 10.18502/jfqhc.11.2.15647

Food processing and manufacture
DOAJ Open Access 2024
Multiomics analysis revealed that the metabolite profile of raw milk is associated with the lactation stage of dairy cows and could be affected by variations in the ruminal microbiota

Mengya Wang, Lei Zhang, Xingwei Jiang et al.

ABSTRACT: The nutritional components and quality of milk are influenced by the rumen microbiota and its metabolites at different lactation stages. Hence, rumen fluid and milk samples from 6 dairy cows fed the same diet were collected during peak lactation, early mid-lactation, and later mid-lactation. Untargeted metabolomics and 16S rRNA sequencing were applied for analyzing milk and rumen metabolites, as well as rumen microbial composition, respectively. The levels of lipid-related metabolites, l-glutamate, glucose-1-phosphate, and acetylphosphate in milk exhibited lactation-dependent attenuation. Maltol, N-acetyl-d-glucosamine, and choline, which are associated with milk flavor or coagulation properties, as well as l-valine, lansioside A, clitocine, and ginsenoside La, increased significantly in early mid-lactation and later mid-lactation, especially in later mid-lactation. The obvious increase in rumen microbial diversities (ACE and Shannon indices) were observed in early mid-lactation compared with peak lactation. Twenty-one differential bacterial genera of the rumen were identified, with Succinivibrionaceae_UCG-001, Candidatus Saccharimonas, Fibrobacter, and SP3-e08 being significantly enriched in peak lactation. Rikenellaceae_RC9_gut_group, Eubacterium_ruminantium_group, Lachnospira, Butyrivibrio, Eubacterium_hallii_group, and Schwartzia were most significantly enriched in early mid-lactation. In comparison, only 2 bacteria (unclassified_f__Prevotellaceae and Prevotellaceae_UCG-001) were enriched in later mid-lactation. For rumen metabolites, LysoPE(16:0), l-glutamate, and l-tyrosine had higher levels in peak lactation, whereas PE(17:0/0:0), PE(16:0/0:0), PS(18:1(9Z)/0:0), l-phenylalanine, dulcitol, 2-(methoxymethyl)furan, and 3-phenylpropyl acetate showed higher levels in early mid-lactation and later mid-lactation. Multiomics-integrated analysis revealed that a greater abundance of Fibrobacter contributed to phospholipid content in milk by increasing ruminal acetate, l-glutamate, and LysoPE(16:0). Prevotellaceae_UCG-001 and unclassified_f_Prevotellaceae provide substrates for milk metabolites of the same category by increasing ruminal l-phenylalanine and dulcitol contents. These results demonstrated that milk metabolomic fingerprints and critical functional metabolites during lactation, and the key bacteria in rumen related to them. These findings provide new insights into the development of functional dairy products.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2024
Combining 2′-fucosyllactose and galacto-oligosaccharides exerts anti-inflammatory effects and promotes gut health

Sewon Park, Yoonhee Park, Yu-Jin Jeong et al.

ABSTRACT: This study investigated the potential of 2′-fucosyllactose (2′-FL) and galacto-oligosaccharides (GOS) combinations as a novel and cost-effective substitute for human milk oligosaccharides (HMO) in promoting gut health and reducing inflammation. In vitro studies using caco-2 cells showed that 2′-FL and GOS combinations (H1 = GOS:2′-FL ratio of 1.8:1; H2 = GOS:2′-FL ratio of 3.6:1) reduced LPS-induced inflammation by decreasing pro-inflammatory markers, whereas individual treatments had no significant effects. In a mouse model of dextran sulfate sodium (DSS)-induced colitis, combined 2′-FL and GOS supplementation alleviated symptoms, improved gut permeability, and enhanced intestinal structure, with the GH1 group (H1 combo with DSS) being the most effective. 2′-Fucosyllactose and GOS combinations also enhanced short-chain fatty acid production in infant fecal batch fermentation and mouse fecal analysis, with GH1 showing the most promising results. The GH1 supplementation altered gut microbiota in mice with DSS-induced colitis, promoting microbial diversity and a more balanced Firmicutes to Bacteroidota ratio. Infant formula products (IFP) containing 2′-FL and GOS combinations (IFP2 = 174 mg of GOS and 95 mg of 2′-FL per 14 g serving, 1.8:1 ratio; IFP3 = 174 mg of GOS and 48 mg of 2′-FL per 14 g serving, 3.6:1 ratio) demonstrated gastrointestinal protective and anti-inflammatory properties in a co-culture model of caco-2 and THP-1 cells. These findings suggest that 2′-FL and GOS combinations have potential applications in advanced infant formulas and supplements to promote gut health and reduce inflammation.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2024
Feeding rumen-protected methionine during the peripartum period improved milk fat content and reduced the culling rate of Holstein cows in a commercial herd

G.F.M. Leão, S.K. Santos, E.J. Askel et al.

ABSTRACT: Researchers have reported the benefits of feeding rumen-protected methionine (RPM) during the peripartum on the health parameters of dairy cows. Rumen-protected Met has reportedly improved milk yield, milk components, and liver health, but the literature is scarce on its effects in commercial herds. Therefore, we aimed to determine the effects of feeding RPM (Smartamine M, Adisseo Inc., Antony, France) prepartum (8 g/cow per day) and postpartum (15 g/cow per day) on performance, metabolic profile, and culling rate of Holstein cows in a commercial herd. One hundred sixty-six (n = 166) Holstein cows, 58 nulliparous and 108 parous, were randomly assigned to 1 of 2 dietary treatments, consisting of TMR top-dressed with RPM (RPMet; 2.35% and 2.24% Met of MP for close-up and fresh cows, respectively) or without (control [CON] 2.03% and 1.89% Met of MP for close-up and fresh cows, respectively), fed from 21 ± 6 d prepartum until 16 ± 5 d postpartum. From 17 DIM until dry-off, all cows received RPMet. Daily milk yield was recorded, and milk samples were collected in the first and second weeks after calving to determine their composition. Blood samples were collected before the morning feeding on −14, −7, +1, +7, and +14 d relative to calving. Mortality and morbidity were recorded during the first 60 DIM. Cows supplemented with RPMet had greater milk yield during the first 16 DIM (31.76 vs. 30.37 kg/d; SEM = 1.04, respectively), and had greater milk fat content (4.45 vs. 4.10%; SEM = 0.11, respectively), but not milk total protein (3.47 vs. 3.39%; SEM = 0.04, respectively) and casein contents (2.74 vs. 2.66%; SEM = 0.04, respectively) than CON cows. Cows in RPMet had increased plasma Met concentrations than cows in CON (24.9 vs. 21.0 µmol/L; SEM = 1.2, respectively). Although morbidity was similar between treatments, the culling rate from calving until 60 DIM was lower for RPMet cows than for CON cows (2.4% vs. 12.1%; SEM = 0.02). In conclusion, cows receiving RPMet have greater milk yield, improved milk fat content, and a lower culling rate at 60 DIM than CON cows.

Dairy processing. Dairy products, Dairying
S2 Open Access 2023
Paleoproteomic evidence reveals dairying supported prehistoric occupation of the highland Tibetan Plateau

Li Tang, S. Wilkin, K. Richter et al.

The extreme environments of the Tibetan Plateau offer considerable challenges to human survival, demanding novel adaptations. While the role of biological and agricultural adaptations in enabling early human colonization of the plateau has been widely discussed, the contribution of pastoralism is less well understood, especially the dairy pastoralism that has historically been central to Tibetan diets. Here, we analyze ancient proteins from the dental calculus (n = 40) of all human individuals with sufficient calculus preservation from the interior plateau. Our paleoproteomic results demonstrate that dairy pastoralism began on the highland plateau by ~3500 years ago. Patterns of milk protein recovery point to the importance of dairy for individuals who lived in agriculturally poor regions above 3700 m above sea level. Our study suggests that dairy was a critical cultural adaptation that supported expansion of early pastoralists into the region’s vast, non-arable highlands, opening the Tibetan Plateau up to widespread, permanent human occupation.

31 sitasi en Medicine
S2 Open Access 2022
Emergence and intensification of dairying in the Caucasus and Eurasian steppes

Ashley Scott, S. Reinhold, T. Hermes et al.

Archaeological and archaeogenetic evidence points to the Pontic–Caspian steppe zone between the Caucasus and the Black Sea as the crucible from which the earliest steppe pastoralist societies arose and spread, ultimately influencing populations from Europe to Inner Asia. However, little is known about their economic foundations and the factors that may have contributed to their extensive mobility. Here, we investigate dietary proteins within the dental calculus proteomes of 45 individuals spanning the Neolithic to Greco-Roman periods in the Pontic–Caspian Steppe and neighbouring South Caucasus, Oka–Volga–Don and East Urals regions. We find that sheep dairying accompanies the earliest forms of Eneolithic pastoralism in the North Caucasus. During the fourth millennium bc, Maykop and early Yamnaya populations also focused dairying exclusively on sheep while reserving cattle for traction and other purposes. We observe a breakdown in livestock specialization and an economic diversification of dairy herds coinciding with aridification during the subsequent late Yamnaya and North Caucasus Culture phases, followed by severe climate deterioration during the Catacomb and Lola periods. The need for additional pastures to support these herds may have driven the heightened mobility of the Middle and Late Bronze Age periods. Following a hiatus of more than 500 years, the North Caucasian steppe was repopulated by Early Iron Age societies with a broad mobile dairy economy, including a new focus on horse milking. Milk proteins from the North Caucasus and Eurasian steppe support the initial development of sheep dairying during the Eneolithic, followed by subsequent intensification and husbandry of different dairy animals during the Middle Bronze Age and later periods.

54 sitasi en Medicine
S2 Open Access 2021
Dairying enabled Early Bronze Age Yamnaya steppe expansions

S. Wilkin, A. V. Ventresca Miller, R. Fernandes et al.

During the Early Bronze Age, populations of the western Eurasian steppe expanded across an immense area of northern Eurasia. Combined archaeological and genetic evidence supports widespread Early Bronze Age population movements out of the Pontic–Caspian steppe that resulted in gene flow across vast distances, linking populations of Yamnaya pastoralists in Scandinavia with pastoral populations (known as the Afanasievo) far to the east in the Altai Mountains1,2 and Mongolia3. Although some models hold that this expansion was the outcome of a newly mobile pastoral economy characterized by horse traction, bulk wagon transport4–6 and regular dietary dependence on meat and milk5, hard evidence for these economic features has not been found. Here we draw on proteomic analysis of dental calculus from individuals from the western Eurasian steppe to demonstrate a major transition in dairying at the start of the Bronze Age. The rapid onset of ubiquitous dairying at a point in time when steppe populations are known to have begun dispersing offers critical insight into a key catalyst of steppe mobility. The identification of horse milk proteins also indicates horse domestication by the Early Bronze Age, which provides support for its role in steppe dispersals. Our results point to a potential epicentre for horse domestication in the Pontic–Caspian steppe by the third millennium bc, and offer strong support for the notion that the novel exploitation of secondary animal products was a key driver of the expansions of Eurasian steppe pastoralists by the Early Bronze Age. Analysis of ancient proteins suggests that Early Bronze Age dairying and horse domestication catalysed eastern Yamnaya migrations.

83 sitasi en Medicine
S2 Open Access 2023
Long-term trends in human body size track regional variation in subsistence transitions and growth acceleration linked to dairying

J. Stock, Emma Pomeroy, C. Ruff et al.

Significance The transition from foraging to herding and farming influenced human health, but the impact of regional differences in trajectories of cultural change on human biology are poorly resolved. We investigate long-term trends in human stature and body mass of 3,507 skeletons from 366 archaeological sites in seven regions with varying trajectories of Holocene subsistence change. We observe declines in body size that preceded the transition to agriculture, and significant regional variation following the transition. Holocene statures and body mass remained relatively stable in primary regions of domestication; however, in areas such as Central and Northern Europe where non-native crops were difficult to establish, increases in stature and body mass coincide with the timing of selective sweeps for lactase persistence.

12 sitasi en Medicine
S2 Open Access 2023
Dairying and the evolution and consequences of lactase persistence in humans

J. Stock, J. Wells

A stable and consistent food source is one of the most important evolutionary challenges facing any species. Mammalian young are typically born incapable of provisioning for themselves, but all mammalian species, through the production of milk, have evolved a unique mechanism for transferring fat, proteins, sugar, as well as immunoglobins, hormones, and nutrients to their young, fueling neural development and growth throughout infancy. Milk is an essential resource for all growing mammals until they are physically able to forage and support themselves nutritionally. It has evolved as a means for mothers to synthesize food for their young, and to provide the intestinal bacteria to optimize an infant’s absorption of nutritional resources (Hinde and German, 2012). For the majority of human societies through time and space, the nutritional role of milk, like all mammals, is related to direct maternal–infant provisioning. While human hunter-gatherers typically do not consume non-human milk or dairy products, with the domestication of ruminant animals many human societies harnessed nonhuman sources of milk for the production of secondary dairy products such as cheese and yogurt, or for direct consumption (Roffet-Salque et al., 2018). While the transition to agriculture was variable in expression based on differences in local ecology and cultural history, the origin of farming and the domestication of plants and animals had a dramatic impact on the temporal and geographic patterning of milk production and consumption across the world (Stock et al., 2023). The transition from hunting and gathering to agricultural subsistence, often referred to as the “Neolithic Revolution,” is characterized by the development of human control over the reproduction of plants and animals, as well as their evolution through artificial selection. This involved a reduction in dietary breadth toward dependence on one or a few highly productive domesticated plants or animals, and has generally been associated with a greater proportion of dietary carbohydrates relative to protein and an increased prevalence of nutritional deficiencies (Cordain et al., 2000). The agricultural transition marks a significant change in human interaction with the natural world, where humans shifted from being predominantly influenced by natural environments to being the agents of environmental change in natural systems (Stephens et al., 2019). In this context, it is often viewed as the beginning of a series of changes in human social organization that directly result from the rise of food production and the storage of surpluses. These include sedentism, property ownership, social hierarchy, specialist craft production and related technological change, greater population density, and increased frequencies of infectious diseases and zoonotic diseases associated with domestic animals. Collectively, these changes have generally been seen This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. © Stock, Wells Implications

6 sitasi en Medicine
DOAJ Open Access 2023
Outdoor access practices in the Canadian dairy industry

Anne-Marieke C. Smid, Vanessa Boone, Melanie Jarbeau et al.

ABSTRACT: Dairy cows are highly motivated to access pasture and have a partial preference for alternative forms of outdoor access (e.g., deep-bedded outdoor sand or wood-chip packs). In addition, Canadians value the provision of outdoor access to dairy cows as they perceive it as important for good cow welfare. In contrast to Europe, Oceania, and the United States, little data exist on the use of outdoor access on Canadian dairy farms. Therefore, our objective was to assess current outdoor access practices for dairy cows in Canada. An online questionnaire was used to determine housing and outdoor access practices for lactating cows, dry cows, pregnant heifers, and weaned, nonpregnant heifers on Canadian dairy farms. The questionnaire was distributed by the 10 provincial milk boards between November 2020 and August 2021, resulting in an 8.9% response rate (n = 903 completed questionnaires). In total, 75% (n = 675) of respondents provided some form of outdoor access to at least 1 cattle class on their farm. Pasture was the most frequently used form of outdoor access for all cattle classes. Based on a weighted average, a total of 29% and 48% of Canadian dairy farms provided lactating and dry cows, respectively, access to pasture; for youngstock, these numbers were 48% and 27% for pregnant heifers and weaned, nonpregnant heifers, respectively. Herd size (for each cow class), indoor housing system, and region were all associated with the provision of pasture. Farms with larger lactating herds less often provided access to pasture; larger herd sizes in terms of weaned, nonpregnant heifers, pregnant heifers, and dry cows were also associated with a lower likelihood of access to pasture. Farms using indoor bedded pack housing for their lactating cows more often provided pasture to this cattle class than farms with freestall or tiestall housing; this likelihood did not differ between farms with tie or freestall housing for this cattle class. Dry cows or pregnant heifers housed in a tiestall were more often provided pasture than freestall-housed dry cows or pregnant heifers. Housing type for weaned, nonpregnant heifers was not associated with the likelihood of pasture provision. Farms in British Columbia or on Canada's East Coast (i.e., Nova Scotia, New Brunswick, and Prince Edward Island) more often provided lactating cows pasture compared with farms in other regions. For the other 3 cattle classes, farms on the East Coast of Canada more often provided pasture than farms in other parts of Canada. These results will inform future decisions regarding outdoor access for Canadian dairy cattle and may also aid in identifying future areas of research. For example, our results may aid in designing housing systems that facilitate outdoor access in larger herds and in areas that are subject to more extreme weather conditions.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2023
Prediction of metabolic status of dairy cows in early lactation using milk fatty acids and test-day variables

Muluken Girma, A.T.M. van Knegsel, S. Heirbaut et al.

ABSTRACT: Early lactation metabolic imbalance is an important physiological change affecting the health, production, and reproduction of dairy cows. The aims of this study were (1) to evaluate the potential of test-day (TD) variables with or without milk fatty acids (FA) content to classify metabolically imbalanced cows and (2) to evaluate the robustness of the metabolic classification with external data. A data set was compiled from 3 experiments containing plasma β-hydroxybutyrate, nonesterified FA, glucose, insulin-like growth factor-I, FA proportions in milk fat, and TD variables collected from 244 lactations in wk 2 after calving. Based on the plasma metabolites, 3 metabolic clusters were identified using fuzzy c-means clustering and the probabilistic membership value of each cow to the 3 clusters was determined. Comparing the mean concentration of the plasma metabolites, the clusters were differentiated into metabolically imbalanced, moderately impacted, and balanced. Following this, the 2 metabolic status groups identified were imbalanced cows (n = 42), which were separated from what we refer to as “others” (n = 202) based on the membership value of each cow for the imbalanced cluster using a threshold of 0.5. The following 2 FA data sets were composed: (1) FA (groups) having high prediction accuracy by Fourier-transform infrared spectroscopy and, thus, have practical significance, and (2) FA (groups) formerly identified as associated with metabolic changes in early lactation. Metabolic status prediction models were built using FA alone or combined with TD variables as predictors of metabolic groups. Comparison was made among models and external evaluations were performed using an independent data set of 115 lactations. The area under the receiver operating characteristics curve of the models was between 75 and 91%, indicating their moderate to high accuracy as a diagnostic test for metabolic imbalance. The addition of FA groups to the TD models enhanced the accuracy of the models. Models with FA and TD variables showed high sensitivities (80–88%). Specificities of these models (73–79%) were also moderate and acceptable. The accuracy of the FA models on the external data set was high (area under the receiver operating characteristics curve between 76 and 84). The persistently good performance of models with Fourier-transform infrared spectroscopy-quantifiable FA on the external data set showed their robustness and potential for routine screening of metabolically imbalanced cows in early lactation.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2023
Comparison of cattle derived from in vitro fertilization, multiple ovulation embryo transfer, and artificial insemination for milk production and fertility traits

Simon Lafontaine, Rémi Labrecque, Patrick Blondin et al.

ABSTRACT: The use of assisted-reproduction technologies such as in vitro fertilization (IVF) is increasing, particularly in dairy cattle. The question of consequences in later life has not yet been directly addressed by studies on large animal populations. Studies on rodents and early data from humans and cattle suggest that in vitro manipulation of gametes and embryos could result in long-term alteration of metabolism, growth, and fertility. Our goal was to better describe these presumed consequences in the population of dairy cows produced by IVF in Québec (Canada) and to compare them to animals conceived by artificial insemination (AI) or multiple ovulation embryo transfer (MOET). To do so, we leveraged a large phenotypic database (2.5 million animals and 4.5 million lactations) from milk records in Québec aggregated by Lactanet (Sainte-Anne-de-Bellevue, QC, Canada) and spanning 2012 to 2019. We identified 304,163, 12,993, and 732 cows conceived by AI, MOET, and IVF, respectively, for a total of 317,888 Holstein animals from which we retrieved information for 576,448, 24,192, and 1,299 lactations (total = 601,939), respectively. Genetic energy-corrected milk yield (GECM) and Lifetime Performance Index (LPI) of the parents of cows were used to normalize for genetic potential across animals. When compared with the general Holstein population, MOET and IVF cows outperformed AI cows. However, when comparing those same MOET and IVF cows with only herdmates and accounting for their higher GECM in the models, we found no statistical difference between the conception methods for milk production across the first 3 lactations. We also found that the rate of Lifetime Performance Index improvement of the IVF population during the 2012 to 2019 period was less than the rate observed in the AI population. Fertility analysis revealed that MOET and IVF cows also scored 1 point lower than their parents on the daughter fertility index and had a longer interval from first service to conception, with an average of 35.52 d compared with 32.45 for MOET and 31.87 for AI animals. These results highlight the challenges of elite genetic improvement while attesting to the progress the industry has made in minimizing epigenetic disturbance during embryo production. Nonetheless, additional work is required to ensure that IVF animals can maintain their performance and fertility potential.

Dairy processing. Dairy products, Dairying
DOAJ Open Access 2023
Comparison of rumen and abomasal infusions of an exogenous emulsifier on fatty acid digestibility of lactating dairy cows

J.M. dos Santos Neto, C.M. Prom, A.L. Lock

ABSTRACT: We evaluated the effects of infusing an exogenous emulsifier (polysorbates-C18:1) either into the rumen or abomasum on fatty acid (FA) digestibility and production responses of lactating dairy cows. Nine ruminally cannulated multiparous Holstein cows (170 ± 13.6 d in milk) were assigned to a treatment sequence in replicated 3 × 3 Latin squares with 18-d periods consisting of 7 d of washout and 11 d of infusion. Treatments were abomasal infusions of water carrier only into the rumen and abomasum (control, CON), 30 g/d polysorbate-C18:1 (T80) infused into the rumen (RUM), or 30 g/d T80 infused into the abomasum (ABO). Emulsifiers were dissolved in water and delivered at 6-h intervals (total daily infusion was divided into 4 equal infusions per day). Cows were fed the same diet that contained [% diet dry matter (DM)] 32.2% neutral detergent fiber (NDF), 16.1% crude protein, 26.5% starch, and 3.41% FA (including 1.96% FA from a saturated FA supplement containing 28.0% C16:0 and 54.6% C18:0). Two orthogonal contrasts were evaluated: (1) the overall effect of T80 {CON vs. average of the T80 infusions [1/2 (ABO + RUM)]}, and (2) the effect of ABO versus RUM infusion. Compared with CON, infusing T80 increased the digestibilities of NDF (2.85 percentage units), total (4.35 percentage units), 16-carbon (3.25 percentage units), and 18-carbon FA (4.60 percentage units), and tended to increase DM digestibility and total and 18-carbon FA absorption. Compared with RUM, ABO decreased the intakes of total (28 g/d), 16-carbon (7 g/d), and 18-carbon FA (19 g/d); tended to increase the digestibility of total and 18-carbon FA; and had no effect on the absorption of total, 16-carbon, or 18-carbon FA. Production responses did not change among our treatments. In conclusion, infusing 30 g/d polysorbates-C18:1 increased NDF and total, 16-carbon, and 18-carbon FA digestibility. Compared with RUM, ABO tended to increase the digestibilities of total and 18-carbon FA; however, this may be related to the fact that ABO reduced the intakes of total, 16-carbon, and 18-carbon FA, not necessarily due to better emulsifying action per se. In summary, ABO and RUM both improved FA absorption.

Dairy processing. Dairy products, Dairying

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