Hasil untuk "Natural history (General)"

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DOAJ Open Access 2023
Population genetic structure and mixed stock analysis of the green sea turtle, Chelonia mydas, reveal reproductive isolation in French Polynesia

Violaine Dolfo, Cécile Gaspar, Jérôme Bourjea et al.

The green turtle, Chelonia mydas, is a migratory marine species with a circumglobal distribution in tropical and temperate waters. Its natal homing behavior leads to a complex genetic structure with genetically differentiated populations that breed separately and mix within the same foraging grounds. Delineating the boundaries of these populations and their connectivity to feeding grounds is important for the management of this species, classified as endangered on the IUCN red list. Here, we examined the genetic structure and the origin of the green turtle in French Polynesia with 239 samples collected during nesting or hatchling events and 204 samples collected outside of nesting events, across 21 islands. Amplification of the 770pb mtDNA control region fragment, the standard base used to characterize haplotype diversity in this species, revealed 23 haplotypes including three novel ones, belonging to 6 different lineages. Haplotype diversity in the rookeries was 0.615, and nucleotide diversity was 0.019, values similar to those in the North West Pacific and Western Indian Oceans, two regions recognized as genetic diversity hotspots for C. mydas. The genetic structure between the Leeward and Windward Islands of the Society archipelago was found to be significant with pairwise Fst index and φst distance. Island groups (Windward Islands, Leeward Islands, Tuamotu) were genetically different from all other identified Pacific management units, with a weak differentiation between American Samoa and Leeward Islands. A mixed-stock analysis for the French Polynesian mixture revealed an exclusive contribution from the French Polynesian rookeries, with negligible input from the other Pacific populations. This study provides the first assessment of the genetic structure of green turtle populations within French Polynesia and fills an essential data gap regarding the genetic diversity of the species and its connectivity to other feeding grounds in the Pacific Ocean. The French Polynesian populations appear to be important contributors to the overall genetic diversity of the species, isolated from other Pacific populations, thus making them essential within the Pacific region. These results have important implications for the conservation of the species at both local and regional scales.

Science, General. Including nature conservation, geographical distribution
DOAJ Open Access 2023
Impact of dynamic factors on the exchange flow between two neighboring bays with contrasting topography during summer: A numerical study

Myeong-Taek Kwak, Yang-Ki Cho

A high-resolution, three-dimensional numerical ocean model was employed to understand the exchange flow through Noryang Channel, which connects Gwangyang Bay and Jinju Bay. These two bays exhibit contrasting topographies, with Gwangyang Bay connected to the open ocean through a broad and deep channel, whereas Jinju Bay is relatively isolated from the open ocean by a narrow and shallow channel. Numerical experiments were conducted to determine the contribution of river discharge, wind stress, surface heat flux, and tides to the exchange flow between the two bays during summer. The results suggested that river discharge was the dominant factor affecting the exchange flow along Noryang Channel. Particularly, a high river discharge during summer increased the sea level in Jinju Bay, creating a barotropic flow toward Gwangyang Bay. However, the dense water entering Gwangyang Bay through the wide and deep channel generated a baroclinic flow toward Jinju Bay along the lower layer of Noryang Channel. An analytical model supported the conclusion that river discharge is the main driver of the exchange flow in Noryang Channel.

Science, General. Including nature conservation, geographical distribution
DOAJ Open Access 2023
New insights into the genetic structure of the outbreak-prone bamboo grasshoppers

Zimeng Song, Sangzi Ze, Chunxiang Liu et al.

IntroductionThe genetic structure of species is shaped by natural (e.g., terrain, climate) and non-natural (e.g., human activities) factors. Geographical isolation and natural barriers are important causes of genetic structure formation of species. Here, we explored this issue in bamboo grasshopper, Ceracris kiangsu, which is an important pest that feeds on bamboo in East and Southeastern Asia.MethodsBased on 186 newly sequenced and 286 previously sequenced mitochondrial COI fragments, and 8 nuclear microsatellite loci, we examined the genetic diversity and population genetic structure of C. kiangsu.ResultsThe degree of genetic differentiation among populations was also high, and Mantel test showed that it was significantly correlated with geographical distance. Principal coordinate analysis and STRUCTURE results revealed two genetically different groups, a South China (S-China) Group and a Southeast Asia (SE-Asia) Group. Climate variables partly explained the population genetic structure. The demographic history and ABC showed that the S-China Group experienced population expansion, whereas the SE-Asia Group was consistently stable.DiscussionOur study demonstrates an obvious population structure maintained in this migratory insect and reveals the potential effect of past climatic change, geographical isolation, and ecological factors on the evolution of their genetic structure.

Evolution, Ecology
DOAJ Open Access 2022
Grazing, egg production and carbon budgets for Calanus finmarchicus across the Fram Strait

Holly E. Jenkins, Holly E. Jenkins, Florence Atherden et al.

Calanoid copepods comprise around 90% of Arctic zooplankton biomass and are fundamental to the ecological and biogeochemical functioning of high-latitude pelagic ecosystems. They accumulate lipid reserves during the productive months and represent an energy-rich food source for higher trophic levels. Rapidly changing climate in the Arctic may alter the quantity and composition of the food environment for one of the key copepod species, Calanus finmarchicus, with as yet unquantified effects on its production. Here we present rates of feeding and egg production in female C. finmarchicus exposed to the range of feeding conditions encountered across the Fram Strait in May/June 2018. Carbon (C) budgets were constructed and used to examine the relationship between feeding and growth (= egg production) in these animals. C-specific ingestion rates (mean ± standard deviation) were highly variable, ranging from 0.015 ± 0.004 to 0.645 ± 0.017 day-1 (mean = 0.295 ± 0.223 day-1), and were positively correlated with food availability. C-specific egg production rates ranged from 0.00 to 0.049 day-1 (mean = 0.012 ± 0.011) and were not correlated with either food availability or ingestion rate. Calculated gross growth efficiencies (GGE: growth/ingestion) were low, 0.12 ± 0.13 (range = 0.01 to 0.39). The assembled C budgets indicate that the average fraction of ingested food that was surplus to the requirements for egg production, respiration and losses to faecal pellets was 0.17 ± 0.42. We suggest that this excess occurred, at least in part, because many of the incubated females were still undergoing the energetically (C-) expensive process of gonad maturation at the time of sampling, an assertion that is supported by the relatively high C:N (nitrogen) ratios of the incubated females, the typically low egg production rates, and gonad maturation status. Ontogenetic development may thus explain the large variability seen in the relationship between egg production and ingestion. The apparently excessive ingestion rates may additionally indicate that recently moulted females must acquire additional N via ingestion to complete the maturation process and begin spawning. Our results highlight the need for improved fundamental understanding of the physiology of high-latitude copepods and its response to environmental change.

Science, General. Including nature conservation, geographical distribution
DOAJ Open Access 2022
Diet analysis of bats killed at wind turbines suggests large‐scale losses of trophic interactions

Carolin Scholz, Christian C. Voigt

Abstract Agricultural practice has led to landscape simplification and biodiversity decline, yet recently, energy‐producing infrastructures, such as wind turbines, have been added to these simplified agroecosystems, turning them into multi‐functional energy‐agroecosystems. Here, we studied the trophic interactions of bats killed at wind turbines using a DNA metabarcoding approach to shed light on how turbine‐related bat fatalities may possibly affect local habitats. Specifically, we identified insect DNA in the stomachs of common noctule bats (Nyctalus noctula) killed by wind turbines in Germany to infer in which habitats these bats hunted. Common noctule bats consumed a wide variety of insects from different habitats, ranging from aquatic to terrestrial ecosystems (e.g., wetlands, farmland, forests, and grasslands). Agricultural and silvicultural pest insects made up about 20% of insect species consumed by the studied bats. Our study suggests that the potential damage of wind energy production goes beyond the loss of bats and the decline of bat populations. Bat fatalities at wind turbines may lead to the loss of trophic interactions and ecosystem services provided by bats, which may add to the functional simplification and impaired crop production, respectively, in multi‐functional ecosystems.

Ecology, General. Including nature conservation, geographical distribution
DOAJ Open Access 2022
Spatial Patterns of Larval and Juvenile Fish Assemblages in an Eddy Area in the Western South China Sea

ChenYan Wu, XiaoGu Wang, JunSheng Zhong et al.

The objective of this study was to investigate influence of meso-scale eddies in the western South China Sea on species composition and spatial patterns of fish larvae and juveniles based on the data collected during summer and autumn in 2012. Nintyeight species belonging to 38 families were collected, including 78 species in summer and 41 species in autumn. The dominant species in summer were Vinciguerria sp. (39.70%), Stephanolepis cirrhifer (11.21%), Caranx sp. (5.45%) and Benthosema pterotum (1.97%). The dominant species in autumn were Gobiidae sp. (15.32%), Ceratoscopelus townsendi (7.26%), Diaphus sp. (6.45%), Astronesthes sp. (5.65%) and Callionymidae sp. (4.03%). Abundance of fish larvae and juveniles in summer was higher than that found in autumn. Similarity cluster analysis results indicated that larval fish assemblages in summer can be divided into two communities: (1) larval fish in the cyclonic eddy; (2) larval fish in the anticyclonic eddies. While in autumn, the larval fish assemblages can be divided into three communities: (1) larval fish without influence of the cyclonic eddy; (2) larval fish influenced slightly by the cyclonic eddy; (3) larval fish gathered near the center of the cyclonic eddy. The variations of abundance and assemblage of larval fish might be attributed to sea surface temperature (SST), sea surface salinity (SSS) and sea level anomaly (SLA).

Science, General. Including nature conservation, geographical distribution
DOAJ Open Access 2020
Predicting Geographic Ranges of Marine Animal Populations Using Stable Isotopes: A Case Study of Great Hammerhead Sharks in Eastern Australia

Vincent Raoult, Clive N. Trueman, Kelsey M. Kingsbury et al.

Determining the geographic range of widely dispersed or migratory marine organisms is notoriously difficult, often requiring considerable costs and typically extensive tagging or exploration programs. While these approaches are accurate and can reveal important information on the species, they are usually conducted on only a small number of individuals and can take years to produce relevant results, so alternative approaches may be preferable. The presence of latitudinal gradients in stable carbon isotope compositions of marine phytoplankton offers a means to quickly determine likely geographic population ranges of species that rely on productivity from these resources. Across sufficiently large spatial and temporal scales, the stable carbon isotopes of large coastal or pelagic marine species should reflect broad geographic patterns of resource use, and could be used to infer geographic ranges of marine populations. Using two methods, one based on a global mechanistic model and the other on targeted low-cost latitudinal sampling of fishes, we demonstrate and compare these stable isotope approaches to determine the core population geography of an apex predator, the great hammerhead (Sphyrna mokarran). Both methods indicated similar geographic ranges and suggested that S. mokarran recorded in south-eastern Australia are likely to be from more northern Australian waters. These approaches could be replicated in other areas where coastlines span predictable geographic gradients in isotope values and be used to determine the core population geography of highly mobile species to inform management decisions.

Science, General. Including nature conservation, geographical distribution
DOAJ Open Access 2020
Mating behavior of the Yellow-throated Marten Martes flavigula (Mammalia: Carnivora: Mustelidae)

Abinash Parida, Meesala Krishna Murthy, G.S. Solanki

In this study, we report the mating behavior of Yellow-throated Marten Martes_flavigula.  A pair was observed mating on a Sterculia villosa tree at the Tuilut anti-poaching camp situated near the core of Dampa Tiger Reserve at 05.35h on 25 November 2018.  Copulation between the pair was observed 14 times with successive coupling rhythms approximately four minutes apart.

Ecology, General. Including nature conservation, geographical distribution
DOAJ Open Access 2020
Intrusion of Kuroshio Helps to Diminish Coastal Hypoxia in the Coast of Northern South China Sea

Hon-Kit Lui, Chen-Tung Arthur Chen, Chen-Tung Arthur Chen et al.

Since half a century ago, the number and area of dead zones (dissolved oxygen (DO) < 2 mg L–1 or 30% saturation) in the coastal oceans has increased dramatically. As widely recognized, the increased terrestrial nutrient and organic matter inputs are the two main factors causing the eutrophication of many coastal oceans. Here we show with decadal observed time series data from stations off the Pearl River Estuary and in the northern South China Sea (nSCS) that a strong intrusion into the nSCS of the West Philippine Sea (WPS) seawater in the form of Kuroshio branch occurred during the warm phase of the Pacific Decadal Oscillation (PDO) around 2003–2004 and 2015–2016 (also a strong El Niño event). Consequently, the DO concentration increased but NO3– and PO43– concentrations decreased in the subsurface layers of the nSCS. The WPS seawater was observed to reach the hypoxic area off the Pearl River Estuary in 2003–2004. Likely, due to the oxygen supply carried by the Kuroshio, little hypoxia developed. Yet, anoxic condition developed in the cold phase of PDO or strong La Niña years with weak Kuroshio intrusions.

Science, General. Including nature conservation, geographical distribution
DOAJ Open Access 2019
Ecological Effects and Ecosystem Shifts Caused by Mass Mortality Events on Early Life Stages of Fish

Erik Olsen, Cecilie Hansen, Ina Nilsen et al.

Mass mortality events (MMEs) are a key concern for the management of marine ecosystems. Specific stages and species are at risk and the causes may be single or cumulative pressure from a range of sources including pollutants, anthropogenic climate change or natural variability. Identifying risk and quantifying effects of plausible scenarios including MMEs are key to stakeholders and a quest for scientists. MMEs affect the whole ecosystem, but are traditionally only studied in relation to specific species, disregarding ecological feedbacks. Here we use an end-to-end ecosystem model adapted to the Nordic and Barents seas to evaluate the species-specific and ecological impacts for 50 years following an MME. MMEs were modeled as 10, 50, or 90% reduced recruitment for cod, herring and haddock, individually or in combination. The MME scenarios were compared to a base case model run that includes the current fishing mortality. All species showed declines in population biomass following an MME, increasing in duration and severity with increasing mortality. Cod biomass rebounded to the base case level within 3–13 years post the MME independent of scenario, while neither haddock nor herring fully rebounded to base case levels within the considered time horizon. Haddock responded much more variably to the mortality scenarios than cod or herring, with some scenarios yielding much higher levels of biomass than the base case. Herring responded negatively to all scenarios, leading to lower herring biomass and a steeper decline of the species than seen in the base case due to persistent harvest pressure. Corresponding responses showed that the demersal guild biomass increased substantially, while the pelagic guild biomass declined. Few effects were observed on the other guilds, including the top predators. Ecosystem effects as measured by ecological indicators were greatest after 5 years, but persisted through the entire model run. Fishery indicators showed the same features, but the responses were stronger than for the ecosystem indicators. Taken together this indicates long-term, ecological response to MMEs that can be described as regime shifts, highlighting the importance of using ecosystem models when evaluating effects of MMEs.

Science, General. Including nature conservation, geographical distribution
DOAJ Open Access 2018
Cutaneous Leishmaniasis Due to Leishmania aethiopica

Saskia van Henten, Wim Adriaensen, Helina Fikre et al.

Leishmania aethiopica is the main causative species for cutaneous leishmaniasis (CL) in Ethiopia. Despite its considerable burden, L. aethiopica has been one of the most neglected Leishmania species. In this review, published evidence on L. aethiopica history, geography, vector, reservoir, epidemiology, parasitology, and immunology is discussed and knowledge gaps are outlined. L. aethiopica endemic regions are limited to the highland areas, although nationwide studies on CL prevalence are lacking. Phlebotomus pedifer and P. longipes are the sandfly vectors and hyraxes are considered to be the main reservoir, but the role of other sandfly species and other potential reservoirs requires further investigation. Where and how transmission occurs exactly are also still unknown. Most CL patients in Ethiopia are children and young adults. Lesions are most commonly on the face, in contrast to CL caused by other Leishmania species which may more frequently affect other body parts. CL lesions caused by L. aethiopica seem atypical and more severe in their presentation as compared to other Leishmania species. Mucocutaneous leishmaniasis and diffuse cutaneous leishmaniasis are relatively common, and healing of lesions caused by L. aethiopica seems to take longer than that of other species. A thorough documentation of the natural evolution of L. aethiopica as well as in depth studies into the immunological and parasitological characteristics that underpin the atypical and severe clinical presentation are needed. Better understanding of CL caused by this parasite species will contribute to interventions related to transmission, prevention, and treatment. Keywords: Cutaneous leishmaniasis, Ethiopia, Leishmania aethiopica

Medicine (General)
DOAJ Open Access 2018
Museos y relatos del pasado. Una experiencia en la asignatura Planificación Didáctica y Prácticas de la enseñanza en Historia

Gonzalo de Amézola, Carlos Dicroce, María Cristina Garriga et al.

The subject Didactic Planning and Practices of teaching in History is part of the last cycle of Teacher Training in History of the National University of La Plata. Within the framework of the course, educational outings are proposed, among other activities, as an educational activity that enriches the teaching process. These are a methodological strategy that opens the debate around other ways of „inhabiting‟the University and the school to promote pedagogical didactic alternatives that interpellate the established academic and school format and invite future teachers to propose them in their own classes, both in the residence and in their next professional practice. They make it possible to approach how museums and the different urban spaces with their monuments and their brands are vehicles of memory. They do not ensure by themselves the contents to be transmitted nor the meanings with which they will be interpreted, since these depend on the recipients, on the readings and appropriations that they make.The route we propose involves reflecting on the marks of memory and looking with different eyes at the spaces lived and traveled daily. The work develops the shared experiences in the Museum of Natural Sciences of the City of La Plata and the Ethnographic Museum of the City of Buenos Aires.

Theory and practice of education, History (General)
DOAJ Open Access 2014
Increase in dimethylsulfide (DMS) emissions due to eutrophication of coastal waters offsets their reduction due to ocean acidification.

Nathalie eGypens, Alberto V. Borges

Available information from manipulative experiments suggested that the emission of dimethylsulfide (DMS) would decrease in response to the accumulation of anthropogenic CO2 in the ocean (ocean acidification). However, in coastal environments, the carbonate chemistry of surface waters was also strongly modified by eutrophication and related changes in biological activity (increased primary production and change in phytoplankton dominance) during the last 50 years. Here, we tested the hypothesis that DMS emissions in marine coastal environments also strongly responded to eutrophication in addition to ocean acidification at decadal timescales. We used the R-MIRO-BIOGAS model in the eutrophied Southern Bight of the North Sea characterized by intense blooms of Phaeocystis that are high producers of dimethylsulfoniopropionate (DMSP), the precursor of DMS. We showed that, for the period from 1951 to 2007, eutrophication actually led to an increase of DMS emissions much stronger than the response of DMS emissions to ocean acidification.

Science, General. Including nature conservation, geographical distribution

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