Hasil untuk "physics.app-ph"

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S2 Open Access 1996
Soil pH and Soil Acidity

G. W. Thomas

Soil pH is probably the single most informative measurement that can be made to determine soil characteristics. At a single glance, pH tells much more about a soil than merely indicating whether it is acidic or basic. For example, availability of essential nutrients and toxicity of other elements can be estimated because of their known relationship with pH. The term pH was "invented" by the Swedish scientist Sorensen (1909) in order to obtain more convenient numbers and the idea quickly caught on. Gillespie and Hurst (1918) seem to have been among the earliest to determine pH (or PH, as it was then called) electrometrically using a platinum-palladium blackhydrogen gas electrode, a calomel reference electrode and a fairly cumbersome potentiometer and galvanometer system. At that period, it was still much more common to use colorimetric methods with indicator dyes than the electrometric method. This changed rapidly, however. Sharp and Hoagland (1919) used a similar but less involved method than Gillespie and Hurst (1918) and Healy and Karraker (1922) used a commercially available platinum-hydrogen gas electrode, potentiometer and galvanometer which had been designed by Clark (1920). The decade of the 1920s saw the development of the quinhydrone electrode which was less fragile and much less expensive than the hydrogen-platinum electrode. But, it was the development of the glass electrode in the 1930s that brought the determination of pH very rapidly to its present importance and convenience. The Beckman Model G pH meter (circa 1931) was practically indestructible and could be used as a portable as well as a laboratory instrument. Although it was cumbersome by today's standards, it was virtually foolproof (except for the constantly failing batteries) and many are still capable of operating if not actually operating today. As recently as two decades ago, the use of the small, handheld portable pH meters then available to determine pH in the field was a very imprecise and hazardous undertaking because both electrodes and meters were subject to sudden failures but this has changed rather abruptly in the last few years. Microcircuitry and plastic have contributed to rugged pH meters and electrodes that withstand

1815 sitasi en Chemistry
S2 Open Access 2015
Visual detection of isothermal nucleic acid amplification using pH-sensitive dyes.

N. Tanner, Yinhua Zhang, T. C. Evans

Nucleic acid amplification is the basis for many molecular diagnostic assays. In these cases, the amplification product must be detected and analyzed, typically requiring extended workflow time, sophisticated equipment, or both. Here we present a novel method of amplification detection that harnesses the pH change resulting from amplification reactions performed with minimal buffering capacity. In loop-mediated isothermal amplification (LAMP) reactions, we achieved rapid (<30 min) and sensitive (<10 copies) visual detection using pH-sensitive dyes. Additionally, the detection can be performed in real time, enabling high-throughput or quantitative applications. We also demonstrate this visual detection for another isothermal amplification method (strand-displacement amplification), PCR, and reverse transcription LAMP (RT-LAMP) detection of RNA. The colorimetric detection of amplification presented here represents a generally applicable approach for visual detection of nucleic acid amplification, enabling molecular diagnostic tests to be analyzed immediately without the need for specialized and expensive instrumentation.

549 sitasi en Chemistry, Medicine
arXiv Open Access 2026
A universal waveguide mass--energy relation for lossy one-dimensional waves in nature

Huayang Cai, Bishuang Chen

Finite, lossy waveguides are ubiquitous: distributed attenuation with partial reflections produces feedback, resonance, delays and decay across electromagnetic, acoustic, photonic, quantum-transport and electrochemical interfaces. Yet standard impedance/scattering tools and weak-loss resonator approximations do not provide low-dimensional invariants that remain predictive under intrinsic asymmetry and realistic boundaries, nor do they cleanly separate total absorption from useful power delivered to a load. Here we develop a unified mass--energy framework for linear, single-mode, one-dimensional systems, in which energy-like and power-flow variables $(\mathcal{U},\mathcal{S})$ satisfy the universal invariant $\mathcal{U}^2-\mathcal{S}^2=|Γ_g|^2$, with the effective standing-wave ``mass'' $|Γ_g|$ becoming state-dependent under asymmetry. The Cai--Smith chart gives a bounded state-space map of stability, feedback proximity and operating states, and makes explicit the divergence between maximum absorption and useful delivery under loss. We derive four laws governing absorption and emission, validate the invariant in multiport optics via coherent perfect absorption at exceptional points using a basis-independent SVD criterion (reconciling quadratic vs quartic near-zero scaling), and map electrochemical polarization onto the same geometry by extracting $|Γ_g|$ from two-mode orthogonal fits to reveal a universal storage-to-transfer transition across pH. This framework provides a transferable design language for dissipative, boundary-controlled systems.

en physics.optics, hep-ex
arXiv Open Access 2025
Microscopic and spectroscopic evidences for multiple ion-exchange reactions controlling biomineralization of CaO.MgO.2SiO2 nanoceramics

R. Vahedifard, E. Salahinejad

This study is focused on the mechanism of in vitro biomineralization on the surface of CaO.MgO.2SiO2 (diopside) nanostructured coatings by scanning electron microscopy, energy-dispersive X-ray spectroscopy and inductively coupled plasma spectroscopy assessments. A homogeneous diopside coating of almost 2 um in thickness was deposited on a medical-grade stainless steel by coprecipitation, dipping and sintering sequences. After soaking the sample in a simulated body fluid (SBF) for 14 days, a layer with the thickness of 8 μm is recognized to be substituted for the primary diopside deposit, suggesting the mineralization of apatite on the surface. Investigations revealed that the newly-formed layer is predominantly composed of Ca, P and Si, albeit with a biased accumulations of P and Si towards the surface and substrate, respectively. The variations in the ionic composition and pH of the SBF due to the incubation of the sample were also correlated with the above-interpreted biomineralization. In conclusion, the multiple ion-exchange reactions related to Ca, Mg, Si and P were found to be responsible for the in vitro bioactivity of nanodiopside.

en cond-mat.mtrl-sci, physics.app-ph
arXiv Open Access 2025
Structure, biomineralization and biodegradation of Ca-Mg oxyfluorosilicates synthesized by inorganic salt coprecipitation

E. Salahinejad, M. Jafari Baghjeghaz

In this research, a novel group of Ca-Mg oxyfluorosilicates containing different levels of fluoride substituting for oxide was synthesized by an inorganic salt coprecipitation process followed by calcination/sintering. The effects of the incorporation of fluoride on the resultant structural characteristics, apatite-forming ability and biodegradability were evaluated by X-ray diffraction, transmission electron microscopy, scanning electron microscopy/energy-dispersive X-ray spectroscopy, Fourier transform infrared spectroscopy, inductively coupled plasma spectroscopy and pH measurements. According to the results, the samples containing up to 2 mol% F present a single-phase structure of diopside (MgCaSi2O6) doped with F. It was also found that to meet the most biomineralization characteristic, the optimal value of fluoride in the homogeneous samples is 1 mol%. In this regard, on the one hand, the partial incorporation of fluoride into apatite (via forming fluorohydroxyapatite) and, on the other hand, the absence of fluorite (CaF2) as a consumer of Ca in the deposits are responsible for achieving the most apatite-forming ability circumstance controlled by an ion-exchange reaction mechanism. In conclusion, this study reflects the merit of the optimization of fluoride-doping into Ca-Mg silicates for development in biomedicine.

en cond-mat.mtrl-sci, physics.app-ph
CrossRef Open Access 2025
Lysosomal Protease-Mediated APP Degradation is pH-Dependent, Mutation-Sensitive, and Facilitates Tau Proteolysis

Caroline Ackley, Zoe Liau, Shruti Arya et al.

Abstract Background: The accumulation and aggregation of amyloid beta (A\(\beta\))---a peptide fragment derived from the proteolytic processing of amyloid precursor protein (APP)---is a central pathological feature of Alzheimer’s disease (AD) and a current target for disease-modifying therapies. Mutations in APP can also drive early-onset AD. While the roles of \(\alpha\)-, $\beta$-, and \(\gamma\)-secretases and their respective cleavage sites in APP processing are well characterized, much less is understood about the routine degradation of APP within sub-cellular compartments like the lysosome. Methods: We applied Multiplexed Substrate Profiling by Mass Spectrometry (MSP-MS) to map cleavage sites within APP that may be targeted by lysosomal proteases, also known as cathepsins. We then employed cell-based and in vitro assays to examine the degradation of both wild-type and mutant APP by these enzymes. Results: Our findings confirm that APP is enriched in the endo-lysosomal compartment, where it is processed by many, but not all, cathepsins. Our experiments reveal that cleavages at several mapped APP sites are sensitive to both changes in pH and the presence of pathogenic variants E693G and E693Q. Additionally, we discovered that the large soluble domain of APP (sAPP) enhances tau cleavage by cathepsin G in vitro. Conclusions: Collectively, these results underscore the importance of lysosomal processing of APP, identify a link between APP and tau, and suggest new avenues for exploring AD pathogenesis. They also point to potential therapeutic targets related to the lysosomal function of APP and its impact on neurodegenerative disease.

arXiv Open Access 2024
Smallest [5,6]fullerene as building blocks for 2D networks with superior stability and enhanced photocatalytic performance

Jiaqi Wu, Bo Peng

The assembly of molecules to form covalent networks can create varied lattice structures with distinct physical and chemical properties from conventional atomic lattices. Using the smallest stable [5,6]fullerene units as building blocks, various 2D C$_{24}$ networks can be formed with superior stability and strength compared to the recently synthesised monolayer polymeric C$_{60}$. Monolayer C$_{24}$ harnesses the properties of both carbon crystals and fullerene molecules, such as stable chemical bonds, suitable band gaps and large surface area, facilitating photocatalytic water splitting. The electronic band gaps of C$_{24}$ are comparable to TiO$_2$, providing appropriate band edges with sufficient external potential for overall water splitting over the acidic and neutral pH range. Upon photoexcitation, strong solar absorption enabled by strongly bound bright excitons can generate carriers effectively, while the type-II band alignment between C$_{24}$ and other 2D monolayers can separate electrons and holes in individual layers simultaneously. Additionally, the number of surface active sites of C$_{24}$ monolayers are three times more than that of their C$_{60}$ counterparts in a much wider pH range, providing spontaneous reaction pathways for hydrogen evolution reaction. Our work provides insights into materials design using tunable building blocks of fullerene units with tailored functions for energy generation, conversion and storage.

en cond-mat.mtrl-sci, physics.app-ph

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