Hasil untuk "physics.app-ph"

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S2 Open Access 1963
THE USE OF LEAD CITRATE AT HIGH pH AS AN ELECTRON-OPAQUE STAIN IN ELECTRON MICROSCOPY

E. Reynolds

Aqueous solutions of lead salts (1, 2) and saturated solutions of lead hydroxide (1) have been used as stains to enhance the electron-scattering properties of components of biological materials examined in the electron microscope. Saturated solutions of lead hydroxide (1), while staining more intensely than either lead acetate or monobasic lead acetate (l , 2), form insoluble lead carbonate upon exposure to air. The avoidance of such precipitates which contaminate surfaces of sections during staining has been the stimulus for the development of elaborate procedures for exclusion of air or carbon dioxide (3, 4). Several modifications of Watson's lead hydroxide stain (1) have recently appeared (5-7). All utilize relatively high pH (approximately 12) and one contains small amounts of tartrate (6), a relatively weak complexing agent (8), in addition to lead. These modified lead stains are less liable to contaminate the surface of the section with precipitated stain products. The stain reported here differs from previous alkaline lead stains in that the chelating agent, citrate, is in sufficient excess to sequester all lead present. Lead citrate, soluble in high concentrations in basic solutions, is a chelate compound with an apparent association constant (log Ka) between ligand and lead ion of 6.5 (9). Tissue binding sites, presumably organophosphates, and other anionic species present in biological components following fixation, dehydration, and plastic embedding apparently have a greater affinity for this cation than lead citrate inasmuch as cellular and extracellular structures in the section sequester lead from the staining solution. Alkaline lead citrate solutions are less likely to contaminate sections, as no precipitates form when droplets of fresh staining solution are exposed to air for periods of up to 30 minutes. The resultant staining of the sections is of high intensity in sections of Aralditeor Epon-embedded material. Cytoplasmic membranes, ribosomes, glycogen, and nuclear material are stained (Figs. 1 to 3). STAIN SOLUTION: Lead citrate is prepared by

25250 sitasi en Biology, Medicine
S2 Open Access 2018
Constraining the climate and ocean pH of the early Earth with a geological carbon cycle model

J. Krissansen‐Totton, G. Arney, D. Catling

Significance The climate and ocean pH of the early Earth are important for understanding the origin and early evolution of life. However, estimates of early climate range from below freezing to over 70 °C, and ocean pH estimates span from strongly acidic to alkaline. To better constrain environmental conditions, we applied a self-consistent geological carbon cycle model to the last 4 billion years. The model predicts a temperate (0–50 °C) climate and circumneutral ocean pH throughout the Precambrian due to stabilizing feedbacks from continental and seafloor weathering. These environmental conditions under which life emerged and diversified were akin to the modern Earth. Similar stabilizing feedbacks on climate and ocean pH may operate on earthlike exoplanets, implying life elsewhere could emerge in comparable environments. The early Earth’s environment is controversial. Climatic estimates range from hot to glacial, and inferred marine pH spans strongly alkaline to acidic. Better understanding of early climate and ocean chemistry would improve our knowledge of the origin of life and its coevolution with the environment. Here, we use a geological carbon cycle model with ocean chemistry to calculate self-consistent histories of climate and ocean pH. Our carbon cycle model includes an empirically justified temperature and pH dependence of seafloor weathering, allowing the relative importance of continental and seafloor weathering to be evaluated. We find that the Archean climate was likely temperate (0–50 °C) due to the combined negative feedbacks of continental and seafloor weathering. Ocean pH evolves monotonically from 6.6−0.4+0.6 (2σ) at 4.0 Ga to 7.0−0.5+0.7 (2σ) at the Archean–Proterozoic boundary, and to 7.9−0.2+0.1 (2σ) at the Proterozoic–Phanerozoic boundary. This evolution is driven by the secular decline of pCO2, which in turn is a consequence of increasing solar luminosity, but is moderated by carbonate alkalinity delivered from continental and seafloor weathering. Archean seafloor weathering may have been a comparable carbon sink to continental weathering, but is less dominant than previously assumed, and would not have induced global glaciation. We show how these conclusions are robust to a wide range of scenarios for continental growth, internal heat flow evolution and outgassing history, greenhouse gas abundances, and changes in the biotic enhancement of weathering.

285 sitasi en Physics, Medicine
S2 Open Access 2018
pH as a Primary Control in Environmental Microbiology: 1. Thermodynamic Perspective

Q. Jin, M. Kirk

pH influences the occurrence and distribution of microorganisms. Microbes typically live over a range of 3 to 4 pH units and are described as acidophiles, neutrophiles, and alkaliphiles, depending on the optimal pH for growth. Their growth rates vary with pH along bell- or triangle-shaped curve, which reflects pH limits of cell structure integrity and the interference of pH with cell metabolism. We propose that pH can also affect the thermodynamics and kinetics of microbial respiration, which then help shape the composition and function of microbial communities. Here we use geochemical reaction modeling to examine how environmental pH controls the energy yields of common redox reactions in anoxic environments, including syntrophic oxidation, iron reduction, sulfate reduction, and methanogenesis. The results reveal that environmental pH changes the energy yields both directly and indirectly. The direct change applies to the reactions that consume or produce protons whereas the indirect effect, which applies to all redox reactions, comes from the regulation of chemical speciation by pH. The results also show that the energy yields respond strongly to pH variation, which may modulate microbial interactions and help give rise to the pH limits of microbial metabolisms. These results underscore the importance of pH as a control on microbial metabolisms and provide insight into potential impacts of pH variation on the composition and activity of microbial communities. In a companion paper, we continue to explore how the kinetics of microbial metabolisms responds to pH variations, and how these responses control the outcome of microbial interactions, including the activity and membership of microbial consortia.

285 sitasi en Chemistry
S2 Open Access 2017
pH-Responsive carriers for oral drug delivery: challenges and opportunities of current platforms

Lin Liu, Wendong Yao, Yuefeng Rao et al.

Abstract Oral administration is a desirable alternative of parenteral administration due to the convenience and increased compliance to patients, especially for chronic diseases that require frequent administration. The oral drug delivery is a dynamic research field despite the numerous challenges limiting their effective delivery, such as enzyme degradation, hydrolysis and low permeability of intestinal epithelium in the gastrointestinal (GI) tract. pH-Responsive carriers offer excellent potential as oral therapeutic systems due to enhancing the stability of drug delivery in stomach and achieving controlled release in intestines. This review provides a wide perspective on current status of pH-responsive oral drug delivery systems prepared mainly with organic polymers or inorganic materials, including the strategies used to overcome GI barriers, the challenges in their development and future prospects, with focus on technology trends to improve the bioavailability of orally delivered drugs, the mechanisms of drug release from pH-responsive oral formulations, and their application for drug delivery, such as protein and peptide therapeutics, vaccination, inflammatory bowel disease (IBD) and bacterial infections.

316 sitasi en Medicine
S2 Open Access 2018
Effect of pH, temperature and freezing-thawing on quantity changes and cellular uptake of exosomes

Yirui Cheng, Qingyu Zeng, Qing Han et al.

Exosomes are cup-shaped small (30–150 nm) extracellular vesicles with the structure of lipid bilayer membrane (Tkach and Thery, 2016) containing proteins, mRNAs and microRNAs that mediate intercellular communication (Valadi et al., 2007). Unlike other extracellular vesicles, exosomes are released into the extracellular space when the multivesicular bodies (MVBs) fuse with the plasma membrane (Colombo et al., 2014). Almost all cell types can secret exosomes and exosomes exist in diverse biological fluids, such as blood, urine, saliva, hydrothorax and breast milk (Thery et al., 2006). Up to now, a number of studies have demonstrated the functions of exosomes in disease development and the potential clinical applications in diagnosis and therapy (Shao et al., 2016). To conduct reproducible studies on exosomal content and function, storage conditions need to have minimal impact on exosomes. There have been a few studies providing partial confirmation of the effect of different storage conditions on exosomes currently. Using exosomes from urine (Zhou et al., 2006) and conditioned medium (Lee et al., 2016) respectively to investigate the influence of storage temperature on exosomes as measured by Western blot, both groups have concluded that storage below −70 °C for a long time is the best temperature for the recovery of exosomes. On the other hand, Sokolova et al. (2011) applied nanoparticle tracking analysis (NTA) to measure the size changes of exosomes at different temperatures, revealing that storage at 37 °C led to more reduction in exosome sizes than that at 4 °C. However, in this study no information about changes in the particle concentration was reported. Some other studies revealed the effect of pH, storage temperature and cycles of freezing and thawing only on the yield of exosome isolation, but not on quantity changes during storage (Akers et al., 2016; Ban et al., 2015; Zhao et al., 2017). Therefore, the standard criterion of exosomal preservation condition is still undefined. Herein, we used HEK 293T cells and ExtraPEG method (Rider et al., 2016) to investigate the influence of multiple storage conditions (temperature, cycles of freezing and thawing, pH) on the quantity changes and cellular uptake of exosomes. ExtraPEG is a new polyethylene glycol (PEG) precipitation method for the purification exosomes without affecting their biological activity. Generally, ultracentrifugation (UC) (Mincheva-Nilsson et al., 2016) is most reliable but time-consuming; and precipitation methods such as ExoQuick (patent number: US20130337440 A1) and ExtraPEG can obtain higher yields of exosomes but with impurity of coprecipitated proteins. First, exosomes from the conditioned medium were extracted by ExtraPEG or UC method. After isolation, transmission electron microscope (TEM), NTA and Western blot were performed to analyze exosomes. Exosomes extracted by UC or ExtraPEG were similar in cupshaped structure (Fig. S1A and S1B), size distribution (Fig. S1C and S1D). And as representative exosome biomarkers, ALG-2-interacting protein X (ALIX), heat shock protein 70 (HSP70) and tumor susceptibility gene 101 (TSG101) were detected in exosomal protein while β-tubulin, widely used as an internal reference to analyze intracellular protein levels, was not detected in exosome samples (Fig. S1E and S1F). These data indicated exosomes were successfully isolated by ExtraPEG method and suitable for the following experiments. After isolation, the exosome pellets were divided equally into several portions and each portion was stored at different temperatures (−80 °C, −20 °C, 4 °C, 37 °C and 60 °C), or through 1–5 cycles of freezing to −80 °C and thawing, or at different pH levels (pH 4, pH 7 and pH 10). After 24 h, NTA and Western blot were performed to measure the remaining quantity of exosomes. Regarding temperatures, the exosomes stored at 4 °C had the highest concentration (Fig. 1A). Consistent with the NTA results, the exosomes stored at 4 °C showed higher levels of representative exosome markers ALIX, HSP70 and TSG101 (Fig. 1B). With the increasing cycles of freezing and thawing, the exosomal concentration and protein levels of ALIX, HSP70 and TSG101 all decreased (Fig. 1D and 1E). For different pH levels, the loss of exosomal concentration and three exosome markers ALIX, HSP70 and TSG101 at pH 4 and pH 10 was more than that at pH 7 (Fig. 1E and 1F). Interestingly, exosomes stored at pH 4 decreased more sharply than that at pH 10 (Fig. 1F and 1G), suggesting that acidic

265 sitasi en Chemistry, Medicine
S2 Open Access 2018
Carbonic Anhydrases: Role in pH Control and Cancer

Mam Y Mboge, B. Mahon, R. McKenna et al.

The pH of the tumor microenvironment drives the metastatic phenotype and chemotherapeutic resistance of tumors. Understanding the mechanisms underlying this pH-dependent phenomenon will lead to improved drug delivery and allow the identification of new therapeutic targets. This includes an understanding of the role pH plays in primary tumor cells, and the regulatory factors that permit cancer cells to thrive. Over the last decade, carbonic anhydrases (CAs) have been shown to be important mediators of tumor cell pH by modulating the bicarbonate and proton concentrations for cell survival and proliferation. This has prompted an effort to inhibit specific CA isoforms, as an anti-cancer therapeutic strategy. Of the 12 active CA isoforms, two, CA IX and XII, have been considered anti-cancer targets. However, other CA isoforms also show similar activity and tissue distribution in cancers and have not been considered as therapeutic targets for cancer treatment. In this review, we consider all the CA isoforms and their possible role in tumors and their potential as targets for cancer therapy.

243 sitasi en Chemistry, Medicine
arXiv Open Access 2025
Tuning electrochemical reactions with ratchet-based ion pumps

Dafna Amichay, Alon Herman, Eden Grossman et al.

Electrochemical reactions are highly sensitive to the physical and chemical environment near the electrodes. Thus, controlling the electrolyte ionic composition and the electrochemical potential of specific ions can modify the overpotential of electrochemical reactions and enhance their selectivity toward the desired products. Ratchet-based ion pumps (RBIPs) are membrane-like devices that utilize temporal potential modulation to drive a net ionic flux with no associated electrochemical reactions. RBIPs were fabricated by coating the surfaces of nanoporous alumina wafers with metals, forming nanoporous capacitors. Placing the RBIP between two electrolyte compartments and applying an alternating signal between the metal layers resulted in a voltage buildup across the membrane, leading to ion pumping. Here, we demonstrate that by modifying the electrochemical potential of ions, RBIPs can accelerate or inhibit electrochemical reactions on the surface of adjacent water-splitting electrodes according to the RBIP input signal. Proton pumping towards a water-splitting cathode prevented proton depletion due to the hydrogen evolution reaction and maintained the pH in the cathode compartment. The combination of ion pumping and ion selectivity can enable the electrolyte composition to be tuned near the electrodes, providing greater control over the electrochemical process.

en physics.app-ph
arXiv Open Access 2025
Bandgap-Dependent Doping of Semiconducting Carbon Nanotube Networks by Proton-Coupled Electron Transfer for Stable Thermoelectrics

Angus Hawkey, Xabier Rodríguez-Martínez, Sebastian Lindenthal et al.

Networks of semiconducting single-walled carbon nanotubes (SWNTs) are a promising material for thermoelectric energy harvesting due to their mechanical flexibility, solution processability, high Seebeck coefficients and high electrical conductivities after chemical p- or n-doping. Here, we demonstrate that proton-coupled electron transfer (PCET) with benzoquinone (BQ) as the oxidant and lithium bis(trifluoromethylsulfonyl)imide (Li[TFSI]) for electrolyte counterions is a promising method for p-doping of polymer-sorted semiconducting SWNT networks. The achieved doping levels, as determined from absorption bleaching, depend directly on both the pH of the aqueous doping solutions and the bandgap (i.e., diameter) of the nanotubes within the network. Fast screening of different nanotube networks under various doping conditions was enabled by a high-throughput setup for thermoelectric measurements of five samples in parallel. For small-bandgap SWNTs, PCET-doping is sufficient to reach the maximum thermoelectric power factors, which are equal to those obtained by conventional methods. In contrast to other doping methods, the electrical conductivity of PCET-doped SWNTs remains stable over at least 5 days in air. These results confirm PCET to be a suitable approach for more environmentally friendly and stable doping of semiconducting SWNTs as promising thermoelectric materials.

en physics.app-ph, cond-mat.mtrl-sci
arXiv Open Access 2025
Significant role of first-principles electron-phonon coupling in the electronic and thermoelectric properties of LiZnAs and ScAgC semiconductors

Vinod Kumar Solet, Sudhir K. Pandey

The half-Heusler (hH) compounds are currently considered promising thermoelectric (TE) materials due to their favorable thermopower and electrical conductivity. Accurate estimates of these properties are therefore highly desirable and require a detailed understanding of the microscopic mechanisms that govern transport. To enable such estimations, we carry out comprehensive first-principles computations of one of the primary factors limiting carrier transport, namely the electron-phonon ($e-ph$) interaction, in representative hH semiconductors such as LiZnAs and ScAgC. Our study first investigates the $e-ph$ renormalization of electronic dispersion based on the non-adiabatic Allen-Heine-Cardona theory. We then solve the Boltzmann transport equation (BTE) under multiple relaxation-time approximations (RTAs) to evaluate the carrier transport properties. Phonon-limited electron and hole mobilities are comparatively assessed using the linearized self-energy and momentum RTAs (SERTA and MRTA), and the exact or iterative BTE (IBTE) solutions within $e-ph$ coupling. Electrical transport coefficients for TE performance are also comparatively analyzed under the constant RTA (CRTA), SERTA, and MRTA schemes. The lattice thermal conductivity, determined from phonon-phonon interaction, is further reduced through nanostructuring techniques. The bulk LiZnAs (ScAgC) compound achieves the highest figure of merit ($zT$) of 1.05 (0.78) at 900 K with an electron doping concentration of 10$^{18}$ (10$^{19}$) cm$^{-3}$ under the MRTA scheme. This value significantly increases to 1.53 (1.0) for a 20 nm nanostructured sample. The remarkably high $zT$ achieved through inherently present phonon-induced electron scattering and the grain-boundary effect in semiconductors opens a promising path for discovering highly efficient and accurate hH materials for TE technology.

en cond-mat.mtrl-sci, cond-mat.mes-hall
arXiv Open Access 2025
Passive Acoustic Monitoring of Underwater Well Leakages with Machine Learning: A Review

Guanlin Zhu, Zechun Deng, Jiaxin Shen et al.

Abandoned oil and gas wells pose significant environmental risks due to the potential leakage of hydrocarbons, brine and chemical pollutants. Detecting such leaks remains extremely challenging due to the weak acoustic emission and high ambient noise in the deep sea. This paper reviews the application of passive sonar systems combined with artificial intelligence (AI) in underwater oil and gas leak detection. The advantages and limitations of traditional monitoring methods, including fibre optic, capacitive and pH sensors, are compared with those of passive sonar systems. Advanced AI methods that enhance signal discrimination, noise suppression and data interpretation capabilities are explored for leak detection. Emerging solutions such as embedded AI analogue-to-digital converters (ADCs), deep learning-based denoising networks and semantically aware underwater optical communication (UOC) frameworks are also discussed to overcome issues such as low signal-to-noise ratio (SNR) and transmission instability. Furthermore, a hybrid approach combining non-negative matrix factorisation (NMF), convolutional neural networks (CNN) and temporal models (GRU, TCN) is proposed to improve the classification and quantification accuracy of leak events. Despite challenges such as data scarcity and environmental change, AI-assisted passive sonar has shown great potential in real-time, energy-efficient and non-invasive underwater monitoring, contributing to sustainable environmental protection and maritime safety management.

en physics.app-ph

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