Semantic Scholar Open Access 2019 1900 sitasi

OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes

Stephan Greiner Pascal Lehwark R. Bock

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Abstrak

OGDRAW has become the standard tool for displaying maps of organellar genomes it converts GenBank entries into graphical maps a new version with improved functionality has been released Abstract Organellar (plastid and mitochondrial) genomes play an important role in resolving phylogenetic relationships, and next-generation sequencing technologies have led to a burst in their availability. The ongoing massive sequencing efforts require software tools for routine assembly and annotation of organellar genomes as well as their display as physical maps. OrganellarGenomeDRAW (OGDRAW) has become the standard tool to draw graphical maps of plastid and mitochondrial genomes. Here were present a new version of OGDRAW equipped with a new front end. Besides several new features, OGDRAW has now access to a local copy of the organelle genome database of the NCBI RefSeq project. Together with batch processing of (multi-)GenBank files, this enables the user to easily visualize large sets of organellar genomes spanning entire taxonomic clades. The new OGDRAW server can be accessed at https://chlorobox.mpimp-golm.mpg.de/OGDraw.html.

Topik & Kata Kunci

Biology Computer Science Medicine

Penulis (3)

Stephan Greiner

Pascal Lehwark

R. Bock

Format Sitasi

APA MLA BibTeX

Greiner, S., Lehwark, P., Bock, R. (2019). OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. https://doi.org/10.1093/nar/gkz238

Akses Cepat

Lihat di Sumber doi.org/10.1093/nar/gkz238

Informasi Jurnal

Tahun Terbit: 2019
Bahasa: en
Total Sitasi: 1900×
Sumber Database: Semantic Scholar
DOI: 10.1093/nar/gkz238
Akses: Open Access ✓