Semantic Scholar Open Access 2012 1193 sitasi

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

Alexei J. Drummond M. Suchard Dong Xie A. Rambaut

Lihat Sumber DOI

Abstrak

Computational evolutionary biology, statistical phylogenetics and coalescent-based population genetics are becoming increasingly central to the analysis and understanding of molecular sequence data. We present the Bayesian Evolutionary Analysis by Sampling Trees (BEAST) software package version 1.7, which implements a family of Markov chain Monte Carlo (MCMC) algorithms for Bayesian phylogenetic inference, divergence time dating, coalescent analysis, phylogeography and related molecular evolutionary analyses. This package includes an enhanced graphical user interface program called Bayesian Evolutionary Analysis Utility (BEAUti) that enables access to advanced models for molecular sequence and phenotypic trait evolution that were previously available to developers only. The package also provides new tools for visualizing and summarizing multispecies coalescent and phylogeographic analyses. BEAUti and BEAST 1.7 are open source under the GNU lesser general public license and available at http://beast-mcmc.googlecode.com and http://beast.bio.ed.ac.uk

Topik & Kata Kunci

Biology Medicine

Penulis (4)

Alexei J. Drummond

M. Suchard

Dong Xie

A. Rambaut

Format Sitasi

APA MLA BibTeX

Drummond, A.J., Suchard, M., Xie, D., Rambaut, A. (2012). Bayesian Phylogenetics with BEAUti and the BEAST 1.7. https://doi.org/10.1093/molbev/mss075

Akses Cepat

Lihat di Sumber doi.org/10.1093/molbev/mss075

Informasi Jurnal

Tahun Terbit: 2012
Bahasa: en
Total Sitasi: 1193×
Sumber Database: Semantic Scholar
DOI: 10.1093/molbev/mss075
Akses: Open Access ✓