Semantic Scholar
Open Access
2018
599 sitasi
Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree.
Guangchuang Yu
T. Lam
Huachen Zhu
Y. Guan
Abstrak
Ggtree is a comprehensive R package for visualizing and annotating phylogenetic trees with associated data. It can also map and visualize associated external data on phylogenies with two general methods. Method 1 allows external data to be mapped on the tree structure and used as visual characteristic in tree and data visualization. Method 2 plots the data with the tree side by side using different geometric functions after reordering the data based on the tree structure. These two methods integrate data with phylogeny for further exploration and comparison in the evolutionary biology context. Ggtree is available from http://www.bioconductor.org/packages/ggtree.
Penulis (4)
G
Guangchuang Yu
T
T. Lam
H
Huachen Zhu
Y
Y. Guan
Akses Cepat
Informasi Jurnal
- Tahun Terbit
- 2018
- Bahasa
- en
- Total Sitasi
- 599×
- Sumber Database
- Semantic Scholar
- DOI
- 10.1093/molbev/msy194
- Akses
- Open Access ✓