Semantic Scholar Open Access 2020 1120 sitasi

Eleven grand challenges in single-cell data science

David Lähnemann Johannes Köster Ewa Szczurek Davis J. McCarthy S. Hicks +46 lainnya

Abstrak

The recent boom in microfluidics and combinatorial indexing strategies, combined with low sequencing costs, has empowered single-cell sequencing technology. Thousands—or even millions—of cells analyzed in a single experiment amount to a data revolution in single-cell biology and pose unique data science problems. Here, we outline eleven challenges that will be central to bringing this emerging field of single-cell data science forward. For each challenge, we highlight motivating research questions, review prior work, and formulate open problems. This compendium is for established researchers, newcomers, and students alike, highlighting interesting and rewarding problems for the coming years.

Topik & Kata Kunci

Penulis (51)

D

David Lähnemann

J

Johannes Köster

E

Ewa Szczurek

D

Davis J. McCarthy

S

S. Hicks

M

M. Robinson

C

C. Vallejos

K

Kieran R. Campbell

N

N. Beerenwinkel

A

A. Mahfouz

L

Luca Pinello

P

P. Skums

A

A. Stamatakis

C

Camille Stephan-Otto Attolini

S

Samuel Aparicio

J

J. Baaijens

M

M. Balvert

B

B. D. Barbanson

A

A. Cappuccio

G

G. Corleone

B

B. Dutilh

M

M. Florescu

V

V. Guryev

R

Rens Holmer

K

Katharina Jahn

T

T. J. Lobo

E

Emma M. Keizer

I

Indu Khatri

S

S. Kiełbasa

J

J. Korbel

A

Alexey M. Kozlov

T

Tzu-Hao Kuo

B

B. Lelieveldt

I

I. Măndoiu

J

J. Marioni

T

T. Marschall

F

Felix Mölder

A

A. Niknejad

L

Lukasz Raczkowski

M

M. Reinders

J

J. Ridder

A

A. Saliba

A

A. Somarakis

O

O. Stegle

F

Fabian J Theis

H

Huan Yang

A

A. Zelikovsky

A

A. Mchardy

B

Benjamin J. Raphael

S

Sohrab P. Shah

A

A. Schönhuth

Format Sitasi

Lähnemann, D., Köster, J., Szczurek, E., McCarthy, D.J., Hicks, S., Robinson, M. et al. (2020). Eleven grand challenges in single-cell data science. https://doi.org/10.1186/s13059-020-1926-6

Akses Cepat

Lihat di Sumber doi.org/10.1186/s13059-020-1926-6
Informasi Jurnal
Tahun Terbit
2020
Bahasa
en
Total Sitasi
1120×
Sumber Database
Semantic Scholar
DOI
10.1186/s13059-020-1926-6
Akses
Open Access ✓