DOAJ Open Access 2014

Microsatellite Primer Development for Post Oak, <i>Quercus stellata</i> (Fagaceae)

Warren B. Chatwin Kyrie K. Carpenter Felix R. Jimenez Dave B. Elzinga Leigh A. Johnson +1 lainnya

Abstrak

Premise of the study: The American Cross Timbers forest ecosystem runs from southeastern Kansas to Central Texas and is primarily composed of post oak (<i>Quercus stellata</i>). This old-growth forest currently occupies only about 2% of its ancestral range. To facilitate genetic research on this species, we developed microsatellite primers specific to post oak from reduced genomic libraries. Methods and Results: Two <i>Q. stellata</i> individuals, sampled from the northern and southern range of the post oak forest, were subject to genomic reduction and 454 pyrosequencing. Bioinformatic analysis identified putative microsatellites from which 12 polymorphic primer sets were screened on three populations. The number of alleles observed ranged from five to 20 across all populations, while observed and expected heterozygosity values ranged from 0.05 to 0.833 and 0.236 to 0.893, respectively, within individual populations. Conclusions: We report the development of microsatellite markers, specific to post oak, to aid the study of genetic diversity and population structure of extant forest remnants.

Topik & Kata Kunci

Penulis (6)

W

Warren B. Chatwin

K

Kyrie K. Carpenter

F

Felix R. Jimenez

D

Dave B. Elzinga

L

Leigh A. Johnson

P

Peter J. Maughan

Format Sitasi

Chatwin, W.B., Carpenter, K.K., Jimenez, F.R., Elzinga, D.B., Johnson, L.A., Maughan, P.J. (2014). Microsatellite Primer Development for Post Oak, <i>Quercus stellata</i> (Fagaceae). https://doi.org/10.3732/apps.1400070

Akses Cepat

PDF tidak tersedia langsung

Cek di sumber asli →
Lihat di Sumber doi.org/10.3732/apps.1400070
Informasi Jurnal
Tahun Terbit
2014
Sumber Database
DOAJ
DOI
10.3732/apps.1400070
Akses
Open Access ✓