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DOAJ Open Access 2021

The EpiDiverse Plant Epigenome-Wide Association Studies (EWAS) Pipeline

Sultan Nilay Can Adam Nunn Dario Galanti David Langenberger Claude Becker +5 lainnya
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Abstrak

Bisulfite sequencing is a widely used technique for determining DNA methylation and its relationship with epigenetics, genetics, and environmental parameters. Various techniques were implemented for epigenome-wide association studies (EWAS) to reveal meaningful associations; however, there are only very few plant studies available to date. Here, we developed the EpiDiverse EWAS pipeline and tested it using two plant datasets, from <i>P. abies</i> (Norway spruce) and <i>Q. lobata</i> (valley oak). Hence, we present an EWAS implementation tested for non-model plant species and describe its use.

Topik & Kata Kunci

Genetics Biotechnology

Penulis (10)

S

Sultan Nilay Can

A

Adam Nunn

D

Dario Galanti

D

David Langenberger

C

Claude Becker

K

Katharina Volmer

K

Katrin Heer

L

Lars Opgenoorth

N

Noe Fernandez-Pozo

S

Stefan A. Rensing

Format Sitasi

APA MLA BibTeX
Can, S.N., Nunn, A., Galanti, D., Langenberger, D., Becker, C., Volmer, K. et al. (2021). The EpiDiverse Plant Epigenome-Wide Association Studies (EWAS) Pipeline. https://doi.org/10.3390/epigenomes5020012

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Informasi Jurnal
Tahun Terbit
2021
Sumber Database
DOAJ
DOI
10.3390/epigenomes5020012
Akses
Open Access ✓