On the origin of Bohemian cattle according to mitochondrial DNA

The genomic structure of extant cattle populations can contribute to the reconstruction of the history of particular breeds or their subpopulations. Genome-wide population resequencing of extant populations of Czech Red Pied (CRP) cattle, its conserved nucleus herd, and Czech Red (CR) cattle detected a T106C polymorphism in mitochondrial DNA shared by the conserved CRP herd with a geographical belt of Anatolian, Illyrian and Eastern Alpine breeds. On the other hand, this SNP is practically absent in the historical cattle breeds associated with Northern Germany, including German Black Pied cattle, Holstein-Friesian and German Red Mountain cattle (GRM). Correspondingly, this indicator SNP was absent in CR cattle, which, like the GRM, belongs to the group of mountain red cattle breeds. It seems that the precursory cattle population in Central Europe was influenced by the germplasm from the Balkans-related group of breeds, thanks to the political and commercial influence of the Northern Italian, Austrian and Hungarian regions. In addition, the presence of this polymorphism in some European aurochs (Bos primigenius) bone remains suggests possible introgression from local aurochs populations. Alternatively, the T106C presence in yaks and in neighbouring cattle breeds in Northern India, China and Korea raises the possibility of origin of this polymorphism from yak populations. The spread of the T106C mutation in alpine regions is consistent with the known role of this mtDNA region in adaptation to the reduced oxygen pressure.