CrossRef Open Access 2025

Pipeline on microarray data analysis: Pre-processing

Rohmatul Fajriyah Noodchanath Kongchouy Wanvisa Saisanan Na Ayudhaya Rahmadi Yotenka Ghiffari Ahnaf Danarwindu

Abstrak

Bioinformatics is blooming and its data are store in some repository offline and or online. Yet some basic concepts are not fully disseminated. The paper intends to provide the reader with a review of one important concept in the pipeline bioinformatics data analysis of microarray, pre-processing. In pre-processing, there are four steps, background correction, normalization, probe correction and summarization. Each step consists of several methods, and we describe each method to give a better understanding on how it works theoretically. We focused on microarray data from Affymetrix platform with single-color chip.

Penulis (5)

R

Rohmatul Fajriyah

N

Noodchanath Kongchouy

W

Wanvisa Saisanan Na Ayudhaya

R

Rahmadi Yotenka

G

Ghiffari Ahnaf Danarwindu

Format Sitasi

Fajriyah, R., Kongchouy, N., Ayudhaya, W.S.N., Yotenka, R., Danarwindu, G.A. (2025). Pipeline on microarray data analysis: Pre-processing. https://doi.org/10.12928/bamme.v5i1.12539

Akses Cepat

Lihat di Sumber doi.org/10.12928/bamme.v5i1.12539
Informasi Jurnal
Tahun Terbit
2025
Bahasa
en
Sumber Database
CrossRef
DOI
10.12928/bamme.v5i1.12539
Akses
Open Access ✓