arXiv Open Access 2023

Approximation of Intractable Likelihood Functions in Systems Biology via Normalizing Flows

Vincent D. Zaballa Elliot E. Hui
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Abstrak

Systems biology relies on mathematical models that often involve complex and intractable likelihood functions, posing challenges for efficient inference and model selection. Generative models, such as normalizing flows, have shown remarkable ability in approximating complex distributions in various domains. However, their application in systems biology for approximating intractable likelihood functions remains unexplored. Here, we elucidate a framework for leveraging normalizing flows to approximate complex likelihood functions inherent to systems biology models. By using normalizing flows in the Simulation-based inference setting, we demonstrate a method that not only approximates a likelihood function but also allows for model inference in the model selection setting. We showcase the effectiveness of this approach on real-world systems biology problems, providing practical guidance for implementation and highlighting its advantages over traditional computational methods.

Topik & Kata Kunci

Penulis (2)

V

Vincent D. Zaballa

E

Elliot E. Hui

Format Sitasi

Zaballa, V.D., Hui, E.E. (2023). Approximation of Intractable Likelihood Functions in Systems Biology via Normalizing Flows. https://arxiv.org/abs/2312.02391

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Informasi Jurnal
Tahun Terbit
2023
Bahasa
en
Sumber Database
arXiv
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Open Access ✓